| Date | Home | vs | Away | Result | Scorers |
| 06-Sep | Xaghra U. | vs | Sta. Venera L. | 2-0 | Rafael Rennardy De Souza Ferreira (2) |
| 06-Sep | Victoria H. | vs | Mdina K. | 7-0 | Elton da Silva (3), Emiliano Lattes (2), Dylan Bellotti, Henrique Maciel |
| 07-Sep | Ghaxaq | vs | Zebbug Rovers | 4-1 | Jurgen Gerada Dean Agius, Uros Markovic, Neil Brownrigg (Gh); Tiago Barbosa (Z) |
| 07-Sep | Siggiewi | vs | Marsasakala | 0-0 aet (4-2 pen) | |
| 07-Sep | Ta' Xbiex | vs | Munxar F. | 1-2 | Cleiton Jose Hinrichs, own goal (M); Matthew Fenech (TX) |
| 07-Sep | Kirkop U. | vs | Kercem A. | 2-3 | Borja Polo Longarela, Sergio Martinez Villa, Ali Oularbi (KA); Ayrton Buhagiar (2)(KU) |
| 09-Sep | SK Victoria W. | vs | Ghajnsielem | 2-3 aet | Igor Misan (2)(SKV); Michael Bezzina, Igor Nedeljkovic, Jhon Arboleda Valencia (Gh) |
| 09-Sep | St. Laurence S. | vs | Xewkija T. | 0-5 | Jackson de Lima, Rodney Buttigieg (3), Claudio Daniel Frances |
| Date | Home | vs | Away | Result | Scorers |
| 13-Sep | Nadur Y. | vs | Oratory Y. | 4-0 | Johan Alberto Castano, Predrag Djordjevic, Brandon Said, Marcelo Barbosa |
| 14-Sep | Sannat L. | vs | Gharghur | 0-1 | Allan Fernandes Moreira |
| 14-Sep | Qala S. | vs | Dingli S. | 2-3 | Gianluca Theuma, Daniel Cilia, Dylan Mercieca (D); Joseph Owen Borg, Frank Azzopardi (Q) |
| 14-Sep | Siggiewi | vs | Victoria H. | 0-4 | Henrique Maciel, Emiliano Lattes (2), Elton da Silva |
| 14-Sep | Mtarfa | vs | Ghaxaq | 0-2 | Clint Vassallo, Jurgen Gerada |
| 15-Sep | Gharb R. | vs | Xewkija T. | 0-2 | Claudio Antunes, Johnny Camilleri |
| 15-Sep | Msida SJ | vs | Attard | 1-2 | Christian Farrugia, Bledi Alla (A); own goal (M) |
| 15-Sep | Xaghra U. | vs | Ghajnsielem | 3-1 | Raffael De Souza Ferreira, Rodrigo Ost Dos Santos, Ander Gonzalo Lago (X); Igor Nedeljkovic (Gh) |
| 13-Sep | Kercem A. | vs | Munxar F. | 5-0 | Milos Perisic (2), Thomas Vella, Borja Polo Longarela (2) |
| Date | Home | vs | Away | Result | Scorers |
| 28-Oct | Dingli S. | vs | Mqabba | 1-3 | Ion Alin Margarit (3)(M); Mark Vassallo (D) |
| 27-Oct | Kercem A. | vs | Fgura U. | 2-1 | Ali Oularbi, Elton Vella (K); Carlos Valero Gonzalez (F) |
| 26-Oct | Marsaxlokk | vs | St. Andrews | 1-3 | Mattia Veselji (2), Malcolm Vella Vidal (SA); Alan Tabone (M) |
| 25-Oct | San Gwann | vs | Marsa | 2-0 | Christian Gauci, Owen Spiteri |
| 28-Oct | Pembroke A. | vs | Xghajra T. | 3-0 | Jean Pierre Mifsud Triganza, Luka Mijic, Joao Pedro Oliveira Santos |
| 27-Oct | Xaghra U. | vs | Victoria H. | 0-3 | Henrique Maciel, Christian Mercieca, Elton Alexande da Silva |
| 26-Oct | Rabat A. | vs | Gharghur | 4-1 | Allan Fernandes Moreira (Gh); Javier Jimenez, Isaac Abela (2), Larens Vella (R) |
| 27-Oct | Zejtun C. | vs | Naxxar L. | 2-1 | Robeiro do Nascimento Santos, Jurgen Suda (Z); Edson Farias Cerqueira (N) |
| 27-Oct | Vittoriosa S. | vs | Nadur Y. | 0-3 | Lucas Barreto da Silva (2), Brandon Said |
| 26-Oct | Mgarr U. | vs | Ghaxaq | 5-1 | Lazar Doric, Joseph Paul Zammit, Gordon Saliba, Jamie Lee Micallef, Kenneth Aquilina (M); Jurgen Gerada (Gh) |
| 25-Oct | Qrendi | vs | Lija A. | 0-5 | Clayton Giordimaina, Erjon Beu (3), Harry Wood |
| 27-Oct | Birzebbuga SP | vs | Xewkija T. | 2-7 | Jose Carlos Nogueira Junior, Joseph Mario Vella, Claudio Antunes Pavlidis (3), Michael Camilleri (2)(X); Andrea Sant (2)(B) |
| 27-Oct | Attard | vs | Zabbar SP | 0-1 | Carl Abela |
| 26-Oct | Pieta H. | vs | St. George’s | 4-1 | James Scicluna (2), Sheldon Pisani, Jeremy Delmar (P); Takumi Hiruma (SG) |
| 27-Oct | Zebbug Rangers | vs | Kalkara U. | 3-1 | Muda Fagbeja (2), Ryan Zammit (Z); Larson Mallia (K) |
| 27-Oct | Qormi | vs | Luqa SA | 1-0 | Tensior Gusman |
| 26-Oct | Mellieha | vs | Swieqi U. | 1-4 | Matheus de Albuquerque de Souza, Felipe Nunes Fernandes (2), Luke Taliana (S); David Fenech (M) |
| 26-Oct | Zurrieq | vs | Melita | 0-2 | Michael Cachia, Daniel Claridge |
| Date | Match | Result | Scorers | ||
| Date | Home | vs | Away | Result | Scorers |
| 30-Nov | Balzan | vs | San Gwann | 3-0 | Michael Johnson, Andrija Majdevac, Alfred Effiong |
| 01-Dec | Zejtun C. | vs | Hibernians | 0-3 | Andrei Agius, Terrence Groothusen (2) |
| 30-Nov | Gzira U. | vs | Senglea A. | 1-2 | Zachary Scerri (G); Jan Tanti, Leighton Grech (S) |
| 30-Nov | St. Andrews | vs | Valletta | 0-4 | Jean Borg, Douglas Packer, Steve Borg (2) |
| 01-Dec | Sliema W. | vs | Santa Lucia | 0-2 | Kevin Ante Rosero, Jackson David Usuga Mendoza |
| 30-Nov | Tarxien R. | vs | Hamrun S. | 1-2 | Wilfried Domoraud (2)(H); Petar Kanzurov (T) |
| 01-Dec | Kercem A. | vs | Sirens | 1-4 | Manuel Angel Bustos (2), Abdullahi Ige Adeshina, Romario Lucas Memezes (S); Darko Krstic (K) |
| 01-Dec | Floriana | vs | Melita | 6-1 | Augusto Rene Caseres (2), Tiago Adan Fonseca, Diego Venancio, Brandon Paiber, Clyde Borg (F); Jean Perre Attard (M) |
| 29-Nov | Qormi | vs | Swieqi U. | 2-2 aet (4-5 pen) | Ayorinde Ebenezer Tejumola (2)(S); Tensior Gusman, Michael Borg (Q) |
| 01-Dec | Rabat A. | vs | Mosta | 0-7 | Matias Muchardi, Zachar Brincat (3), Dexter Xuereb, Jean Barthelemy Diouf (2) |
| 29-Nov | Pembroke A. | vs | Zabbar SP | 6-0 | Jean Pierre Mifsud Triganza, Luka Mijic (3), Joao Pedro Oliveira Santos, Darko Todorovski |
| 01-Dec | Birkirkara | vs | Nadur Y. | 1-0 | Federico Falcone |
| 01-Dec | Zebbug R. | vs | Victoria H. | 3-5 | Elton Alexandre da Silva (3), Henrique de Souza Maciel, Emiliano Lattes (V); Saturday Nanapere, Muda Fagbeja (Z) |
| 30-Nov | Gudja U. | vs | Lija A. | 3-0 | Aidan Jake Friggieri, Miguel Antonio Jimenez, Anderson De Barros |
| 30-Nov | Mqabba | vs | Pieta' H. | 0-3 | Jose Lucas Caetano da Silva (2), James Scicluna |
| 01-Dec | Xewkija T. | vs | Mgarr U. | 5-2 | Jose Carlos Nogueira Junior, Jackson De Lima, Milos Stojanovic (2), Claudio Antunes Pavlidis (X); Kenneth Aquilina (M) |
| Date | Home | vs | Away | Result | Scorers |
| 26-Jan | Swieqi U. | vs | Hamrun S. | 1-3 | Karl Micallef (2), Nicola Leone (H); Roderick Taliana (S) |
| 25-Jan | Balzan | vs | Santa Lucia | 2-0 | Andrija Majdevac, Ivan Bozovic |
| 25-Jan | Pembroke A. | vs | Hibernians | 0-4 | Dunstan Vella, Imanol Iriberri, Ferdinando Apap, Myles Beerman |
| 26-Jan | Victoria H. | vs | Gudja U. | 1-3 | Aidan Jake Friggieri, Edison Bilbao Zarate, Rundell Winchester (G); Elton Alexandre da Silva (V) |
| 25-Jan | Pieta' H. | vs | Xewkija T. | 2-1 | Clyde Bouvet, Jose Lucas Caetano da Silva (P); Claudio Antunes Pavlidis (X) |
| 25-Jan | Floriana | vs | Senglea A. | 2-0 aet | Diego Venancio, Brandon Paiber |
| 26-Jan | Valletta | vs | Sirens | 4-1 | Bojan Kaljevic, Matteo Piciollo, Jhony Cano (V); Sergio Raphael dos Anjos (S) |
| 24-Jan | Mosta | vs | Birkirkara | 1-2 | Caio Henrique Prado (2)(B); Zachary Brincat (M) |
| Date | Home | vs | Away | Result | Scorers |
| 29-Feb | Balzan | vs | Pieta' H. | 0-1 | Jose Lucas Caetano da Silva |
| 29-Feb | Valletta | vs | Gudja U. | 2-0 | Bojan Kaljevic (2) |
| 01-Mar | Hibernians | vs | Hamrun S. | 2-1 aet | Valdo Goncalves Alhinho (HS); Jorge Santos Silva, Imanol Iriberri (Hib) |
| 01-Mar | Floriana | vs | Birkirkara | 1-1 aet (3-1 pen) | Claudio Bonanni (B); Augusto Rene Caseres (F) |
The semi-finals an final were not played following a decision by the MFA Executive Committee to terminate the FA Trophy on May 18 due to the COVID-19 pandemic.